Molecular Dynamics Simulations
Mostrando 1-12 de 464 artigos, teses e dissertações.
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1. In silico Evaluation of Cucurbit[6]uril as a Potential Detector for Cocaine and Its Adulterants Lidocaine, Caffeine, and Procaine
Illicit drugs and their trafficking require worldwide efforts in investigation, detection, and control. Colorimetric tests are often applied to identify drugs. Cocaine has some well-known adulterants that can provide a false positive response. Cucurbit[6]uril (CB[6]) has been suggested as a potential detector for cocaine and other illicit drugs. This work us
J. Braz. Chem. Soc.. Publicado em: 2021-04
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2. Molecular Modelling Study of Heteroarylamide/Sulfonamide Compounds with Antitrypanosomal Activity
According to the World Health Organization (WHO), Chagas disease (CD), whose etiological agent is the Trypanosoma cruzi (T. cruzi) parasite, affects about eight million people, mainly in Latin America. The cruzain enzyme is highlighted among the main biological targets, since it is the most abundant of the cysteine protease class from T. cruzi and is involve
J. Braz. Chem. Soc.. Publicado em: 2021-01
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3. Agradecimentos aos Pareceristas ad hoc do volume 18 (ano 2020)
According to the World Health Organization (WHO), Chagas disease (CD), whose etiological agent is the Trypanosoma cruzi (T. cruzi) parasite, affects about eight million people, mainly in Latin America. The cruzain enzyme is highlighted among the main biological targets, since it is the most abundant of the cysteine protease class from T. cruzi and is involve
Trab. educ. saúde. Publicado em: 2021-01
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4. Understanding Solvent/Bixin Interactions by Raman Spectroscopy
In this work, Raman spectroscopy and density functional theory (DFT) calculations have been used in order to understand the nature of the interaction between the carotenoid bixin and organic solvents with dielectric constant varying from ca. 2 (toluene) to ca. 47 (dimethyl sulfoxide). Raman shifts registered for the main carotenoid marker band, the C=C stret
J. Braz. Chem. Soc.. Publicado em: 2020-07
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5. IMPLEMENTAÇÃO DO CAMPO DE FORÇA CLAYFF NO GROMACS: UMA APLICAÇÃO EM ESTRUTURA DE CAULINITA
Molecular dynamics techniques are increasingly being used for material science studies, being a theoretical approach based on molecular mechanics studies. GROMACS is a free software that allows the development of simulations of various types of molecules, from biological molecules to inorganic structures associated with the area of materials, requiring the s
Quím. Nova. Publicado em: 2020-06
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6. DINÂMICA MOLECULAR REATIVA DA ABERTURA DO ANEL EPÓXI EM REAÇÕES COM POLIAMINA Ellen
The molecular dynamics simulations were used to study the epoxy ring-opening in the determination of kinetic parameters, with a temperature range from 1500 to 2500 K in a 20 x 20 x 20 Å unit cell containing 15 molecules of C2H4O (ethylene oxide) and 35 molecules of CH6N2 (methanediamine). The activation energy values for epoxy and diamine was 66 and 92 kJ m
Quím. Nova. Publicado em: 2020-05
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7. On Estimation of Adhesive Strength of Implants Bioactive Coating with Titanium by Density Functional Theory and Molecular Dynamics Simulations
One of the ways to improve and accelerate osseointegration of a surgical implant with bone is application of biocompatible coatings, in particular, hydroxyapatite (HAp). Since the cases of delamination of the coating take place in dental practice, it is very important to estimate the adhesive strength of HAp with the implant. A measure of the coating-to-subs
Mat. Res.. Publicado em: 30/05/2019
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8. Efeito da Taxa de Resfriamento na Liga Ni80Cu20 via Dinâmica Molecular
RESUMO A simulação em Dinâmica Molecular (MD) é uma poderosa ferramenta para estudo de ligas amorfas nanométricas. Neste artigo, a MD foi empregada para o estudo da liga Ni80Cu20. As simulações foram realizadas com o código livre LAMMPS, em um sistema contendo 2.000 átomos com interação atômica dada pelo potencial de Finnis-Sinclair (EAM-FS). O a
Matéria (Rio J.). Publicado em: 20/05/2019
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9. REACTIVE MOLECULAR DYNAMICS SIMULATION AND CHEMICAL KINETIC EVALUATION OF COMBUSTION OF TRIETHYLALUMINIUM (TEA)
The combustion process of triethylaluminum is investigated by means of reactive molecular dynamics simulations using the ReaxFF force field. The behavior of the system in five different temperatures ranging from 2000-4000 K was evaluated. As a pyrophoric material, TEA reacts also with water, generating gaseous hydrogen, whose content increases with the syste
Quím. Nova. Publicado em: 2018-05
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10. EMPREGO DE QUÍMICA COMPUTACIONAL NA VERIFICAÇÃO E VALIDAÇÃO DA PRESSÃO DE DETONAÇÃO DE EXPLOSIVO PLÁSTICO-PBX
Prediction of chemical explosions parameters is an important step for blast tests for civil and military applications. Applying computational chemistry and experimental results, this paper presents the decay rate of pressure in air from the epicenter of 2.70 kg of PBX-Plastic bonded explosive detonation to the distance of 2.0 meters. Pressure in the epicente
Quím. Nova. Publicado em: 2018-03
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11. Molecular Dynamics Simulations of Cetyltrimethylammonium Bromide (CTAB) Micelles and their Interactions with a Gold Surface in Aqueous Solution
Surfactants are molecular structures with remarkable physicochemical properties and applications. Most of their characteristics are due to their ability to promote aggregation and interactions with different interfaces. The scarcity of theoretical studies dedicated to evaluating the forces involved in these interactions prompted us to propose other models ca
J. Braz. Chem. Soc.. Publicado em: 2018-01
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12. Study of Glass Forming on Cu60.0Zr32.5Ti7.5 Alloy by Molecular Dynamics Simulation
This paper presents the results of Molecular Dynamics (MD) simulations of Cu60.0Zr32.5Ti7.5 alloy through the open source code LAMMPS. Amorphous samples were produced by quenching the molten metal from 2300 to 300 K. The pair distribution functions of the liquid and solid were calculated. Moreover, the atomic short-range order at 800, 700 and 300 K was obtai
Mat. Res.. Publicado em: 21/12/2017