Snp Markers
Mostrando 1-12 de 130 artigos, teses e dissertações.
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1. Alternative methodologies for genotyping polymorphisms in the CAST and CAPN1 genes in beef cattle
ABSTRACT The objectives of this study were to genotype single nucleotide polymorphisms (SNP) AF159246:g.2959A>G (CAST/DdeI) and AF248054.2:g.6545C>T (CAPN4751) in beef cattle by PCR-RFLP (Polymerase Chain Reaction - Restriction Fragment Length Polymorphism), using the restriction enzyme DdeI for both SNP, and describe the use of these genotyping methodologie
R. Bras. Zootec.. Publicado em: 28/11/2019
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2. Detection of Snps in the Melanocortin 1-Receptor (MC1R) and Its Association with Shank Color Trait in Hs Chicken
ABSTRACT The melanocortin 1 receptor (MC1R) gene plays a key role in controlling the deposition of melanin. In mammals, the MC1Rgene is regarded as a major candidate gene in the control of melanin formation. In domestic animals, the MC1R gene mainly controls the expression of coat, skin, and plumage color in mammals and birds. In order to breed chickens with
Braz. J. Poult. Sci.. Publicado em: 25/11/2019
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3. Genetic linkage map and mapping of the locus of biological nitrogen fixation inefficiency in cowpea
ABSTRACT. The objectives of the present study were to construct a cowpea genetic map using the F2 population resulting from the cross IC-1 x BRS Marataoã, based on single nucleotide polymorphism (SNP) markers, and to map the cpi gene, with additional reference to introgression with the consensus map of species, aiming to identify markers for assisted select
Acta Sci., Agron.. Publicado em: 23/09/2019
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4. Characterization of pepper accessions using molecular markers linked to pungency and SSR
RESUMO Pimentas do gênero Capsicum possuem grande importância socioeconômica, sendo a pungência seu principal atrativo. A caracterização da pungência, as estimativas de distâncias genéticas e a análise da estrutura populacional entre os acessos pertencentes a Bancos de Germoplasma são importantes para seleção de genitores que permitam obtenção
Hortic. Bras.. Publicado em: 18/07/2019
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5. Association mapping in common bean revealed regions associated with Anthracnose and Angular Leaf Spot resistance
ABSTRACT: Despite important biotic stresses to common bean, Anthracnose (ANT) and Angular Leaf Spot (ALS) can cause losses of up to 80 % and occur in more than 60 countries around the world. Genetic resistance is the most sustainable strategy to manage these diseases. Thus, we aimed to (1) identify new SNP markers associated with ALS and ANT resistance loci
Sci. agric. (Piracicaba, Braz.). Publicado em: 2019-07
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6. Identification of duplicates in cassava germplasm banks based on single-nucleotide polymorphisms (SNPs)
ABSTRACT: Genetic redundancy in cassava (Manihot esculenta Crantz) presents a challenge to efficient management of genetic resources. This study aimed to identify and define the genetic structure of duplicates in cassava germplasm from various Embrapa research units, using single-nucleotide polymorphism (SNP) markers. We evaluated 2,371 accessions with 20,71
Sci. agric. (Piracicaba, Braz.). Publicado em: 2019-07
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7. Development and validation of SNP assays for the selection of resistance to Meloidogyne incognita in soybean
Abstract This work aimed to develop and validate individual SNP molecular markers previously identified in a genetic association study of resistance to Meloidogyne incognita in soybean using a microarray panel. The markers identified in the array were converted in single TaqMan® markers. The single markers were used to create an SNP genotyping protocol and
Crop Breed. Appl. Biotechnol.. Publicado em: 11/04/2019
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8. SNP markers associated with soybean partial resistance to Phytophthora sojae
Abstract Phytophthora root and stem rot is one of the most aggressive diseases in soybean crop. The use of resistant cultivars is the main strategy to reduce losses caused by the pathogen. This study aims to identify SNP markers associated with genes or QTLs that provide soybean with partial resistance to Phytophthora sojae. A total of 169 soybean cultivars
Crop Breed. Appl. Biotechnol.. Publicado em: 11/04/2019
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9. Linkage disequilibrium and past effective population size in native Tunisian cattle
Abstract To carry out effective genome-wide association studies, information about linkage disequilibrium (LD) is essential. Here, we used medium-density SNP chips to provide estimates of LD in native Tunisian cattle. The two measures of LD that were used, mean r2 and D’, decreased from 0.26 to 0.05 and from 0.73 to 0.40, respectively, when the distance be
Genet. Mol. Biol.. Publicado em: 18/02/2019
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10. Evaluation of SSR and SNP markers in Rubus glaucus Benth progenitors selection
Resumo Amora de castilla (Rubus glaucus Benth) é um dos produtos com maior potencial de desenvolvimento agrícola Colômbiano, que combina características dos subgéneros Idaeobatus e Rubus. Apesar da sua reconhecida importância na geração de rendas para os pequenos produtores, este cultivo tem recebido pouco desenvolvimento tecnológico. Como resultad
Rev. Bras. Frutic.. Publicado em: 31/01/2019
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11. Association of candidate genes for fatty acid content in soybean by temperature-switch PCR (TSP) genotyping
Abstract The development of molecular markers is essential for improvement of soybean cultivars with modified fatty acid content. The objective of this study was to identify and validate SNP markers in candidate genes for fatty acid content in soybean. Six candidate genes (ARAF, PDAT, ABI3, FAD2-1b, FAD3B, and FAD3C) were selected. Alignment of gene sequence
Crop Breed. Appl. Biotechnol.. Publicado em: 2018-09
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12. Linkage disequilibrium levels and allele frequency distribution in Blanco Orejinegro and Romosinuano Creole cattle using medium density SNP chip data
Abstract The linkage disequilibrium (LD) between molecular markers affects the accuracy of genome-wide association studies and genomic selection application. High-density genotyping platforms allow identifying the genotype of thousands of single nucleotide polymorphisms (SNPs) distributed throughout the animal genomes, which increases the resolution of LD ev
Genet. Mol. Biol.. Publicado em: 2018-06