Multi Locus Sequences Analysis
Mostrando 1-7 de 7 artigos, teses e dissertações.
-
1. Phylogenetic placement of Tritirachium strains from the URM culture collection originally founded by Augusto Chaves Batista (1916-1967) in Brazil, and the description of T. batistae sp. nov.
ABSTRACT Twenty-seven Tritirachium strains were present in the URM culture collection originally founded in Brazil by Augusto Chaves Batista. Fifteen freshly-prepared cultures were obtained from these original strains preserved under mineral oil. DNA was extracted for analysing phylogenetic relationships using the sequence information available from Tritirac
Acta Bot. Bras.. Publicado em: 2020-06
-
2. Caracterização taxonômica de espécies do gênero Xanthomonas / Taxonomic characterization of Xanthomonas species
Xanthomonas species are responsible for diseases causing economic losses in many crops. These phytopathogens have been subject of several taxonomic studies resulting in significant changes at interespecific or infraspecific level. This study aimed the taxonomic characterization of Xanthomonas species including: (1) differentiation and phylogenetic analysis o
IBICT - Instituto Brasileiro de Informação em Ciência e Tecnologia. Publicado em: 06/03/2012
-
3. Isolamento e caracterização de locos de microssatélite para Neothraupis fasciata, (Emberizidae, Passeriformes, Aves),
Microsatellite molecular markers are small repeated sequences in tanden compound of 1 to 6 nucleotides. Widely used as genetic markers, the microsatellites have a particular attribute that is the high rates of mutation. These molecular markers or are widely used in conservation genetics, population genetics, forensic research, diagnosis of diseases, ecologic
Publicado em: 2009
-
4. Taxonomia e diversidade genética de rizóbios microssimbiontes de distintas leguminosas com base na análise polifásica (Box-PCR e 16 S RNAr) e na metodologia de MLSA
The term rhizobia is generically applied to bacteria capable of fixing the atmospheric nitrogen (N2) and converting it to a form assimilable by the plant, when in symbiosis with plants of the Leguminosae family. However, besides their ecological and economic importance, the rhizobia have not been subject of many studies. Based on the data obtained with t
Publicado em: 2008
-
5. Multi-Virulence-Locus Sequence Typing of Listeria monocytogenes
A multi-virulence-locus sequence typing (MVLST) scheme was developed for subtyping Listeria monocytogenes, and the results obtained using this scheme were compared to those of pulsed-field gel electrophoresis (PFGE) and the published results of other typing methods, including ribotyping (RT) and multilocus sequence typing (MLST). A set of 28 strains (eight d
American Society for Microbiology.
-
6. Detection and analysis of spliced chimeric mRNAs in sequence databanks
We have developed a databank screening procedure, the In Silico Trans-splicing Retrieval System (ISTReS), to identify heterologous, spliced mRNAs with potential origin from chromosomal translocations, mRNA trans-splicing and multi-locus transcription. A parsing algorithm to screen cDNA versus genome Blast outputs was implemented. Key filtering criteria were
Oxford University Press.
-
7. Mulan: Multiple-sequence local alignment and visualization for studying function and evolution
Multiple-sequence alignment analysis is a powerful approach for understanding phylogenetic relationships, annotating genes, and detecting functional regulatory elements. With a growing number of partly or fully sequenced vertebrate genomes, effective tools for performing multiple comparisons are required to accurately and efficiently assist biological discov
Cold Spring Harbor Laboratory Press.