Fragments Assembly Programs
Mostrando 1-4 de 4 artigos, teses e dissertações.
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1. DNA fragments assembly programs: a comparative study. / Ferramentas de auxílio ao seqüenciamento de DNA por montagem de fragmentos: um estudo comparativo.
Atualmente, existe um grande número de ferramentas para montagem de fragmentos de DNA disponíveis. Neste trabalho apresentamos um estudo comparativo das ferramentas CAP2, FAKtory, TIGR e PHRAP. Para realizarmos este estudo, primeiramente executamos esses sistemas de montagem sobre 12 casos de testes distintos. Após isso, tomamos os resultados obtidos por
Publicado em: 2000
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2. Apple II PASCAL programs for molecular biologists.
A collection of PASCAL programs designed for the Apple II microcomputer is presented. These DNA sequence handling and analysis programs are interactive and may be used even by people with no computer experience. The package allows the user to enter a sequence from the keyboard, to modify it, to generate the reverse complement, to create new sequences from pa
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3. An optimized protocol for analysis of EST sequences
The vast body of Expressed Sequence Tag (EST) data in the public databases provide an important resource for comparative and functional genomics studies and an invaluable tool for the annotation of genomic sequences. We have developed a rigorous protocol for reconstructing the sequences of transcribed genes from EST and gene sequence fragments. A key element
Oxford University Press.
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4. viewGene: A Graphical Tool for Polymorphism Visualization and Characterization
The human genome project is producing an enormous amount of sequence data, based on which single base changes between individuals can be identified. Unfortunately, computer tools that were adequate for sequence assembly are less than ideal for the characterization of polymorphism data [single nucleotide (snp) or insertion/deletion (indel)] and other sequence
Cold Spring Harbor Laboratory Press.