SSEP: secondary structural elements of proteins
AUTOR(ES)
Shanthi, V.
FONTE
Oxford University Press
RESUMO
SSEP is a comprehensive resource for accessing information related to the secondary structural elements present in the 25 and 90% non-redundant protein chains. The database contains 1771 protein chains from 1670 protein structures and 6182 protein chains from 5425 protein structures in 25 and 90% non-redundant protein chains, respectively. The current version provides information about the α-helical segments and β-strand fragments of varying lengths. In addition, it also contains the information about 310-helix, β- and ν-turns and hairpin loops. The free graphics program RASMOL has been interfaced with the search engine to visualize the three-dimensional structures of the user queried secondary structural fragment. The database is updated regularly and is available through Bioinformatics web server at http://cluster.physics.iisc.ernet.in/ssep/ or http://144.16.71.148/ssep/.
ACESSO AO ARTIGO
http://www.pubmedcentral.nih.gov/articlerender.fcgi?artid=168914Documentos Relacionados
- Secondary structural complementarity between DNA and proteins.
- Structural elements of metal selectivity in metal sensor proteins
- Funnel sculpting for in silico assembly of secondary structure elements of proteins
- Location of DNA-binding proteins and disulfide-linked proteins in vaccinia virus structural elements.
- Xenopus laevis 18S ribosomal RNA: experimental determination of secondary structural elements, and locations of methyl groups in the secondary structure model.