O-GLYCBASE: a revised database of O-glycosylated proteins.
AUTOR(ES)
Hansen, J E
RESUMO
O-GLYCBASE is a comprehensive database of information on glycoproteins and their O-linked glycosylation sites. Entries are compiled and revised from the SWISS-PROT and PIR databases as well as directly from recently published reports. Nineteen percent of the entries extracted from the databases needed revision with respect to O-linked glycosylation. Entries include information about species, sequence, glycosylation site and glycan type, and are fully referenced. Sequence logos displaying the acceptor specificity for the GaINAc transferase are shown. A neural network method for prediction of mucin type O-glycosylation sites in mammalian glycoproteins exclusively from the primary sequence is made available by E-mail or WWW. The O-GLYCBASE database is also available electronically through our WWW server or by anonymous FTP.
ACESSO AO ARTIGO
http://www.pubmedcentral.nih.gov/articlerender.fcgi?artid=145605Documentos Relacionados
- O-GLYCBASE version 2.0: a revised database of O-glycosylated proteins.
- O-GLYCBASE Version 3.0: a revised database of O-glycosylated proteins.
- O-GLYCBASE version 4.0: a revised database of O-glycosylated proteins.
- Synthesis of an O-glycosylated cell surface protein induced in yeast by α factor
- The yeast cell fusion protein FUS1 is O-glycosylated and spans the plasma membrane.
