Identification of patterns in biological sequences at the ALGGEN server: PROMO and MALGEN

AUTOR(ES)

Farré, Domènec

FONTE

Oxford University Press

RESUMO

In this paper we present several web-based tools to identify conserved patterns in sequences. In particular we present details on the functionality of PROMO version 2.0, a program for the prediction of transcription factor binding site in a single sequence or in a group of related sequences and, of MALGEN, a tool to visualize sequence correspondences among long DNA sequences. The web tools and associated documentation can be accessed at http://www.lsi.upc.es/~alggen (RESEARCH link).

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